------- SECIS element -- id:1 -- grade:B ----
 Chromosome = CM007940.1:subseq_17467393,102281_ Strand = + Positions = 72642 - 72713
 Found by:  Infernal (score=10.58)
 Stem2 length = 10   Apical loop length = 9   Insertion in stem2 = 1, 0
 Free Energy = -15.14

         ..(((((((.........((((((((((.(((((...............)))))))))))))))........)))))))..
 model   uucggucaugcg--UuaAUGAcGgccug-gcccuAAAcCcuuuuuggggcgggccaggcCuGAUGuuuuuucaugaccggc
         ..(((((((.........([[{(({(((.(((((.....-..-----..))))))))}))}]])..--..-.)))))))..
 target  UCUUGUCACUGGAACUGGUGAAGGUGCACUUGUGGCAGC-GG-----AACACGAUGCCCUCGAGAU--AU-CGUGACAGCU
                           ****                                      ****                 

------- SECIS element -- id:2 -- grade:B ----
 Chromosome = CM007940.1:subseq_17467393,102281_ Strand = - Positions = 13963 - 13882
 Found by:  Infernal (score=10.5)
 Stem2 length = 9   Apical loop length = 20   Insertion in stem2 = 0, 0
 Free Energy = -7.24

         ..(((((((.............(((((((((((((......................)))))))))))))........)))))))..
 model   uucggucaugcg------UuaAUGAcGgccuggcccgAAAcCcuuuuuggggug---ggccaggcCuGAUGuuuuuucaugaccggc
         ...((((((.............{[[(((((((({((....................))}))))))))]]}----..-.))))))...
 target  CUCUUACUCCCUCUCAGCCCUGUGAUGUUUUUCCCGACCUCUUCCCCACAGCUUUCUGAGAAAGACAGAU----UA-AGAGUAAUCU
                               ****           ^^                           ****                 

------- SECIS element -- id:3 -- grade:C ----
 Chromosome = CM007940.1:subseq_17467393,102281_ Strand = + Positions = 92805 - 92884
 Found by:  Infernal (score=10.45) Covels (score=7.86)
 Stem2 length = 8   Apical loop length = 15   Insertion in stem2 = 0, 0
 Free Energy = -9.29

         ..(((((((........(((((((((((((((...............)))))))))))))))..........)))))))..
 model   uucggucaugcg-UuaAUGAcGgccuggcccuAAAcCcuuuuuggggcgggccaggcCuGAUGuu-u-uuucaugaccggc
         ..(((((((........{[[{({{(({((([(...............)])))}))}})}]]}......-...)))))))..
 target  CAGGGGCUGCUCAUUGGUGAUGUUCACCAUAAAAUAAGCUUGUAUGCUGAUGAUGUCCUGAUAUUCAU-CUCUAGUCCCGA
                          ****           ^^                        ****                   

------- SECIS element -- id:4 -- grade:B ----
 Chromosome = CM007940.1:subseq_17467393,102281_ Strand = - Positions = 77643 - 77569
 Found by:  Infernal (score=10.29) Covels (score=0.36)
 Stem2 length = 9   Apical loop length = 15   Insertion in stem2 = 0, 0
 Free Energy = -14.1

         ..(((((((.......(((((((((((((((.................)))))))))))))))..........)))))))..
 model   uucggucaugcgUuaAUGAcGgccuggcccuAAAcC--cuuuuuggggcgggccaggcCuGAUGuu-u-uuucaugaccggc
         ..((((((((......{[[{((([(((((.------..............)))))])))}]]}......-..))))))))..
 target  UAUAGCAGUUCAACGGUGAUGGGGGUUUUG------AAUCAUAAAAGGAAAAGACACCUUGAUAUGAAG-CCAACUGCUAAG
                         ****                ^^                     ****